STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc66a1Solute carrier family 66 member 1. (316 aa)    
Predicted Functional Partners:
bckdhb
Branched chain keto acid dehydrogenase E1 subunit beta.
     
 0.765
dus2
Dihydrouridine synthase 2.
 
      0.685
ctns
Cystinosin, lysosomal cystine transporter.
    
 
 0.629
ENSSAUP00010055490
Pyruvate dehydrogenase E1 beta subunit.
     
 0.598
LOC115581806
Sepiapterin reductase-like.
    
  0.584
spr
Sepiapterin reductase.
    
  0.584
gda
Guanine deaminase.
   
 
  0.556
ENSSAUP00010026896
annotation not available
   
 
  0.543
amdhd1
Amidohydrolase domain containing 1.
   
 
  0.543
ebna1bp2
EBNA1 binding protein 2.
      
 0.513
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.