STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eefsecEukaryotic elongation factor, selenocysteine-tRNA specific. (585 aa)    
Predicted Functional Partners:
ENSSAUP00010065018
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
 0.998
eif2s2
Eukaryotic translation initiation factor 2 subunit beta.
   
 0.997
eif2s1
Eukaryotic translation initiation factor 2 subunit alpha.
   
 0.995
ENSSAUP00010044223
Eukaryotic translation initiation factor 3, subunit G.
   
 0.994
eif3i
Eukaryotic translation initiation factor 3 subunit I.
   
 0.993
ENSSAUP00010017663
Eukaryotic translation initiation factor 3, subunit Bb.
   
 0.993
rps3
Ribosomal protein S3.
  
 0.991
rps6
Ribosomal protein S6.
  
 0.991
LOC115571361
Eukaryotic translation initiation factor 3 subunit C.
   
 0.991
eif3d
Eukaryotic translation initiation factor 3 subunit D.
   
 0.988
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.