STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pfdn5Prefoldin subunit 5. (155 aa)    
Predicted Functional Partners:
pfdn1
Prefoldin subunit 1.
   
 0.999
vbp1
VHL binding protein 1.
   
 0.999
ENSSAUP00010036641
Prefoldin subunit 6.
   
 0.999
ENSSAUP00010006996
Prefoldin subunit 4.
  
 0.998
pfdn2
Prefoldin subunit 2.
   
 0.998
cct4
Chaperonin containing TCP1 subunit 4.
   
 0.975
cct2
Chaperonin containing TCP1 subunit 2.
   
 0.944
cct3
Chaperonin containing TCP1 subunit 3.
   
 0.943
tcp1
T-complex 1.
   
 0.937
cct7
Chaperonin containing TCP1 subunit 7.
   
 0.931
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.