Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSSAUP00010008760 | bdnf | ENSSAUP00010008760 | ENSSAUP00010004553 | Nerve growth factor a (beta polypeptide). | Brain derived neurotrophic factor. | 0.929 |
ENSSAUP00010008760 | ntrk1 | ENSSAUP00010008760 | ENSSAUP00010033397 | Nerve growth factor a (beta polypeptide). | Neurotrophic receptor tyrosine kinase 1. | 0.892 |
ENSSAUP00010012094 | LOC115579334 | ENSSAUP00010012094 | ENSSAUP00010016052 | annotation not available | ephrin-A1-like. | 0.570 |
ENSSAUP00010012094 | efna1 | ENSSAUP00010012094 | ENSSAUP00010035151 | annotation not available | Ephrin A1. | 0.586 |
ENSSAUP00010012094 | ntrk1 | ENSSAUP00010012094 | ENSSAUP00010033397 | annotation not available | Neurotrophic receptor tyrosine kinase 1. | 0.891 |
ENSSAUP00010047203 | bdnf | ENSSAUP00010047203 | ENSSAUP00010004553 | Neurotrophin 3. | Brain derived neurotrophic factor. | 0.958 |
ENSSAUP00010047203 | ntrk1 | ENSSAUP00010047203 | ENSSAUP00010033397 | Neurotrophin 3. | Neurotrophic receptor tyrosine kinase 1. | 0.924 |
LOC115566291 | LOC115579334 | ENSSAUP00010066829 | ENSSAUP00010016052 | ephrin-A2-like. | ephrin-A1-like. | 0.586 |
LOC115566291 | efna1 | ENSSAUP00010066829 | ENSSAUP00010035151 | ephrin-A2-like. | Ephrin A1. | 0.587 |
LOC115566291 | ntrk1 | ENSSAUP00010066829 | ENSSAUP00010033397 | ephrin-A2-like. | Neurotrophic receptor tyrosine kinase 1. | 0.891 |
LOC115568326 | igf1 | ENSSAUP00010068564 | ENSSAUP00010035993 | Insulin-like. | Insulin like growth factor 1. | 0.910 |
LOC115568326 | ntrk1 | ENSSAUP00010068564 | ENSSAUP00010033397 | Insulin-like. | Neurotrophic receptor tyrosine kinase 1. | 0.894 |
LOC115575081 | bdnf | ENSSAUP00010046844 | ENSSAUP00010004553 | Uncharacterized LOC115575081. | Brain derived neurotrophic factor. | 0.874 |
LOC115575081 | igf1 | ENSSAUP00010046844 | ENSSAUP00010035993 | Uncharacterized LOC115575081. | Insulin like growth factor 1. | 0.479 |
LOC115575081 | ntrk1 | ENSSAUP00010046844 | ENSSAUP00010033397 | Uncharacterized LOC115575081. | Neurotrophic receptor tyrosine kinase 1. | 0.934 |
LOC115579334 | ENSSAUP00010012094 | ENSSAUP00010016052 | ENSSAUP00010012094 | ephrin-A1-like. | annotation not available | 0.570 |
LOC115579334 | LOC115566291 | ENSSAUP00010016052 | ENSSAUP00010066829 | ephrin-A1-like. | ephrin-A2-like. | 0.586 |
LOC115579334 | ntrk1 | ENSSAUP00010016052 | ENSSAUP00010033397 | ephrin-A1-like. | Neurotrophic receptor tyrosine kinase 1. | 0.891 |
bdnf | ENSSAUP00010008760 | ENSSAUP00010004553 | ENSSAUP00010008760 | Brain derived neurotrophic factor. | Nerve growth factor a (beta polypeptide). | 0.929 |
bdnf | ENSSAUP00010047203 | ENSSAUP00010004553 | ENSSAUP00010047203 | Brain derived neurotrophic factor. | Neurotrophin 3. | 0.958 |
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