STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLEKHG4BPleckstrin homology and RhoGEF domain containing G4B. (1735 aa)    
Predicted Functional Partners:
ENSSAUP00010012818
Neogenin 1b.
    
 0.505
dcc
DCC netrin 1 receptor.
    
 0.505
LOC115580493
Immunoglobulin superfamily DCC subclass member 4-like.
    
 0.496
ENSSAUP00010000104
Ras homolog family member H.
    
 0.481
LOC115578553
Cell division control protein 42 homolog.
    
 0.481
LOC115584902
Rho-related GTP-binding protein RhoA-B-like.
    
 0.481
rhobtb3
Rho related BTB domain containing 3.
    
 0.481
LOC115575004
Ras-related C3 botulinum toxin substrate 3-like.
    
 0.481
LOC115584850
Rho-related GTP-binding protein RhoA-C-like.
    
 0.481
RHOF
Rho-related GTP-binding protein RhoF-like.
    
 0.481
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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