STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115571930Dynamin-3-like. (843 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
   
 0.996
ENSSAUP00010018110
Intersectin 2b.
    
 
 0.877
ENSSAUP00010040996
Intersectin 2a.
    
 
 0.877
dnajc6
DnaJ heat shock protein family (Hsp40) member C6.
   
 0.838
pink1
PTEN induced kinase 1.
    
 0.827
itsn1
Intersectin 1.
    
 
 0.778
LOC115583120
Interferon-induced GTP-binding protein Mx-like.
    
 
0.773
LOC115589621
endophilin-A1-like.
   
 0.758
LOC115591122
endophilin-A2-like.
   
 0.758
LOC115580758
endophilin-A1-like.
   
 0.758
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.