STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010034587annotation not available (789 aa)    
Predicted Functional Partners:
ENSSAUP00010007246
Ribosome production factor 2 homolog.
   
 
 0.737
ENSSAUP00010064522
Ribosome biogenesis regulator 1 homolog.
   
 
 0.660
rpl11
Ribosomal protein L11.
    
 
 0.621
RPL5
Ribosomal protein L5.
    
 
 0.617
RPL5-2
60S ribosomal protein L5-like.
    
 
 0.617
grwd1
Glutamate rich WD repeat containing 1.
   
  
 0.584
gtpbp4
GTP binding protein 4.
   
  
 0.552
noc2l
NOC2 like nucleolar associated transcriptional repressor.
   
    0.551
ENSSAUP00010030525
WD repeat domain 36.
   
    0.551
wdr43
WD repeat domain 43.
   
    0.551
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.