STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acad9acyl-CoA dehydrogenase family member 9. (631 aa)    
Predicted Functional Partners:
ndufaf1
NADH:ubiquinone oxidoreductase complex assembly factor 1.
   
 0.974
ecsit
ECSIT signaling integrator.
   
 0.972
eci2
enoyl-CoA delta isomerase 2.
  
 0.971
hadha
hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha.
  
 0.966
hadhb
hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta.
  
 0.963
ENSSAUP00010053923
Electron transfer flavoprotein subunit alpha.
  
 0.958
scp2
Sterol carrier protein 2.
  
 0.957
timmdc1
Translocase of inner mitochondrial membrane domain containing 1.
    
 0.954
ndufaf3
NADH:ubiquinone oxidoreductase complex assembly factor 3.
    
 0.950
ENSSAUP00010008391
NADH:ubiquinone oxidoreductase core subunit S3.
  
 0.949
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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