STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115588406ATP-binding cassette sub-family G member 2-like. (667 aa)    
Predicted Functional Partners:
abcg5
ATP binding cassette subfamily G member 5.
   
0.901
abcc2
ATP binding cassette subfamily C member 2.
  
 0.811
atp5f1c
ATP synthase F1 subunit gamma.
  
   0.671
LOC115596496
Cytochrome c oxidase assembly protein COX15 homolog.
    
 0.666
ENSSAUP00010000280
Apolipoprotein A-Ib.
   
 0.646
tiprl
TOR signaling pathway regulator.
 
   
 0.640
LOC115568472
Uncharacterized LOC115568472.
   
 
 0.639
cdca8
Cell division cycle associated 8.
  
 
 0.638
atp5f1d
ATP synthase F1 subunit delta.
  
   0.636
igbp1
Immunoglobulin binding protein 1.
    
 0.636
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.