STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arxAristaless related homeobox. (463 aa)    
Predicted Functional Partners:
prrx1
Paired related homeobox 1.
     
0.851
TLX3
T cell leukemia homeobox 3.
    
 
0.716
LOC115568276
T-cell leukemia homeobox protein 2-like.
    
 
0.716
tlx1
T cell leukemia homeobox 1.
    
 
0.716
LOC115579640
LIM domain-binding protein 1.
    
 0.584
ldb2
LIM domain binding 2.
    
 0.584
LOC115596618
LIM domain-binding protein 1-A-like.
    
 0.584
zbtb32
Zinc finger and BTB domain containing 32.
    
   0.566
tollip
Toll interacting protein.
    
   0.566
ENSSAUP00010000023
annotation not available
    
 0.561
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.