STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115571737Netrin-3-like. (634 aa)    
Predicted Functional Partners:
unc5b
Unc-5 netrin receptor B.
    
 0.930
ENSSAUP00010012818
Neogenin 1b.
    
 0.904
dcc
DCC netrin 1 receptor.
    
 0.904
LOC115580493
Immunoglobulin superfamily DCC subclass member 4-like.
    
 0.899
ENSSAUP00010024500
Unc-5 netrin receptor A.
    
 0.897
draxin
Dorsal inhibitory axon guidance protein.
    
 
 0.800
igdcc3
Immunoglobulin superfamily DCC subclass member 3.
    
 0.793
LOC115578396
Immunoglobulin superfamily DCC subclass member 3-like.
    
 0.793
fndc1
Fibronectin type III domain containing 1.
    
 0.785
LOC115581182
Netrin receptor UNC5C-like.
    
 0.759
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.