STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115586017AT-rich interactive domain-containing protein 3A-like. (575 aa)    
Predicted Functional Partners:
ENSSAUP00010003656
Sap30-like.
    
 0.760
actl6a
Actin like 6A.
    
 
 0.682
ENSSAUP00010025652
BRMS1 like transcriptional repressor b.
    
 0.662
ENSSAUP00010048234
annotation not available
    
 0.662
suds3
SDS3 homolog, SIN3A corepressor complex component.
    
 0.662
ENSSAUP00010068124
BRMS1 transcriptional repressor and anoikis regulator.
    
 0.662
SMARCB1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1.
    
 
 0.650
LOC115593138
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like.
    
 
 0.650
LOC115582587
Protein polybromo-1-like.
   
 
 0.649
LOC115582783
Protein polybromo-1-like.
   
 
 0.649
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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