STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115574475Protein farnesyltransferase subunit beta-like. (458 aa)    
Predicted Functional Partners:
fnta
Farnesyltransferase, CAAX box, alpha.
    
 0.992
zmpste24
Zinc metallopeptidase STE24.
     
 0.919
dhdds
Dehydrodolichyl diphosphate synthase subunit.
     
 0.914
fdps
Farnesyl diphosphate synthase.
   
 0.910
ggps1
Geranylgeranyl diphosphate synthase 1.
   
 0.909
pdss1
Decaprenyl diphosphate synthase subunit 1.
   
 0.909
pdss2
Decaprenyl diphosphate synthase subunit 2.
   
 0.897
nus1
NUS1 dehydrodolichyl diphosphate synthase subunit.
     
 0.896
LOC115593715
CAAX prenyl protease 2-like.
    
 0.896
ENSSAUP00010051628
Ras converting CAAX endopeptidase 1a.
    
 0.896
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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