STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl57Mitochondrial ribosomal protein L57. (103 aa)    
Predicted Functional Partners:
mrpl52
Mitochondrial ribosomal protein L52.
   
 
 0.950
gadd45gip1
GADD45G interacting protein 1.
   
   0.948
mrpl4
Mitochondrial ribosomal protein L4.
    
   0.945
mrpl30
Mitochondrial ribosomal protein L30.
   
   0.940
mrpl10
Mitochondrial ribosomal protein L10.
    
   0.939
mrpl41
Mitochondrial ribosomal protein L41.
   
 
 0.938
ENSSAUP00010068298
Mitochondrial ribosomal protein L47.
   
 
 0.938
mrpl28
Mitochondrial ribosomal protein L28.
    
   0.936
mrps30
Mitochondrial ribosomal protein S30.
    
   0.935
mrpl39
Mitochondrial ribosomal protein L39.
    
   0.935
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.