STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010039971Snf2-related CREBBP activator protein. (2076 aa)    
Predicted Functional Partners:
ENSSAUP00010033278
RuvB-like AAA ATPase 1.
    
 0.974
dmap1
DNA methyltransferase 1 associated protein 1.
   
 0.974
ruvbl2
RuvB like AAA ATPase 2.
   
 0.973
vps72
Vacuolar protein sorting 72 homolog.
    
 0.970
actl6a
Actin like 6A.
    
 0.969
yeats4
YEATS domain containing 4.
    
 0.967
LOC115585912
Mortality factor 4-like protein 1.
    
 0.941
cfdp1
Craniofacial development protein 1.
    
 
 0.915
actr6
Actin related protein 6.
    
 
 0.914
znhit1
Zinc finger HIT-type containing 1.
    
 
 0.902
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.