STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115573373Kinesin-1 heavy chain. (963 aa)    
Predicted Functional Partners:
LOC115575812
Kinesin light chain 1-like.
   
 0.868
klc2
Kinesin light chain 2.
   
 0.868
ENSSAUP00010035763
annotation not available
   
 0.868
klc1
Kinesin light chain 1.
   
 0.868
nphp3
Nephrocystin 3.
   
 0.821
KIF5B
Kinesin family member 5B.
  
  
 
0.814
ENSSAUP00010007266
Kinesin family member 5C.
  
  
 
0.801
KIF5C
Kinesin family member 5C.
  
  
 
0.801
LOC115593266
Alpha-synuclein-like.
     
 0.748
kif11
Kinesin family member 11.
    
0.710
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.