STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
skap1Src kinase associated phosphoprotein 1. (366 aa)    
Predicted Functional Partners:
LOC115590832
FYN-binding protein 1-like.
   
 0.941
dab1
DAB adaptor protein 1.
   
 0.740
ENSSAUP00010025051
annotation not available
   
 0.740
LOC115572908
Disabled homolog 1-like.
   
 0.740
c8b
Complement C8 beta chain.
   
 0.740
LOC115573158
Uncharacterized LOC115573158.
   
 0.740
dab2
DAB adaptor protein 2.
   
 0.740
LOC115593413
Lymphocyte cytosolic protein 2-like.
   
  0.557
blnk
B cell linker.
   
  0.557
FIG4
FIG4 phosphoinositide 5-phosphatase.
      
 0.547
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.