STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
snapc3Small nuclear RNA activating complex polypeptide 3. (382 aa)    
Predicted Functional Partners:
ENSSAUP00010008202
annotation not available
    
 0.998
ENSSAUP00010017909
annotation not available
    
 0.982
ENSSAUP00010031666
Small nuclear RNA activating complex, polypeptide 1b.
    
 0.982
gtf2a2
General transcription factor IIA subunit 2.
    
  0.975
snapc5
Small nuclear RNA activating complex polypeptide 5.
    
 0.972
gtf2b
General transcription factor IIB.
    
 0.963
ENSSAUP00010025507
General transcription factor IIA, 1.
    
  0.946
tbp
TATA-box binding protein.
   
 0.921
LOC115571558
TATA-box-binding protein-like.
   
 0.921
gtf2f1
General transcription factor IIF subunit 1.
    
  0.917
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.