STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115583756-3Histone H2A. (127 aa)    
Predicted Functional Partners:
mysm1
Myb like, SWIRM and MPN domains 1.
    
 0.994
LOC115593995
Lysine-specific demethylase 6B-like.
    
 0.856
kdm6b
Lysine demethylase 6B.
    
 0.856
LOC115595819
Histone H2B-like.
 
 0.856
kdm6a
Lysine demethylase 6A.
    
 0.856
LOC115577314
Histone demethylase UTY-like.
    
 0.856
LOC115572138
Late histone H2B.L4-like.
 
 0.855
ENSSAUP00010062713
Ribosomal protein S27a.
   
  0.853
LOC115583796-2
Histone H2B 1/2.
 
 0.852
H2BC21
H2B clustered histone 21.
 
 0.852
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.