STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115566335Neutral cholesterol ester hydrolase 1-like. (415 aa)    
Predicted Functional Partners:
LOC115566012
B1 bradykinin receptor-like.
    
 0.943
ndufv2
NADH:ubiquinone oxidoreductase core subunit V2.
   
  0.879
ace
Angiotensin I converting enzyme.
    
 0.857
LOC115579463
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial.
   
 0.852
LOC115566823
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like.
   
 0.852
ENSSAUP00010013503
annotation not available
    
 0.850
NDUFS1
NADH:ubiquinone oxidoreductase core subunit S1.
    
 0.850
LOC115583771
Cytochrome c1, heme protein, mitochondrial-like.
    
 0.818
tdo2
Tryptophan 2,3-dioxygenase.
  
 
 0.815
kmo
Kynurenine 3-monooxygenase.
  
 
 0.814
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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