STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pde6cPhosphodiesterase 6C. (858 aa)    
Predicted Functional Partners:
LOC115595951
Retinal guanylyl cyclase 2-like.
   
 0.902
LOC115585049
Guanine nucleotide-binding protein G(t) subunit alpha-2-like.
   
 0.900
ENSSAUP00010046194
annotation not available
     
 0.886
adcy5
Adenylate cyclase 5.
    
 0.878
LOC115585262
Adenylate cyclase type 6-like.
    
 0.877
LOC115575988
Heat-stable enterotoxin receptor-like.
    
 0.876
adcy6
Adenylate cyclase 6.
    
 0.876
LOC115571003
Heat-stable enterotoxin receptor-like.
    
 0.875
ENSSAUP00010039256
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
   
 0.867
LOC115589132
Retinal guanylyl cyclase 2-like.
   
 0.866
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.