STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cep55Centrosomal protein 55. (524 aa)    
Predicted Functional Partners:
dlgap5
DLG associated protein 5.
   
  
 0.971
kif11
Kinesin family member 11.
   
  
 0.962
ttk
TTK protein kinase.
   
  
 0.935
ect2
Epithelial cell transforming 2.
   
 
 0.917
pbk
PDZ binding kinase.
   
  
 0.913
ENSSAUP00010028713
Abnormal spindle microtubule assembly.
   
  
 0.909
ndc80
NDC80 kinetochore complex component.
   
  
 0.907
KIF23
Kinesin family member 23.
   
 
 0.904
kif4a
Kinesin family member 4A.
   
  
 0.904
pdcd6ip
Programmed cell death 6 interacting protein.
    
 
 0.904
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.