STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010042592annotation not available (945 aa)    
Predicted Functional Partners:
fancm
FA complementation group M.
    
 0.896
ENSSAUP00010015827
annotation not available
 
     0.661
h6pd
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
   
 
 0.660
lin52
Lin-52 DREAM MuvB core complex component.
    
 0.571
lin9
Lin-9 DREAM MuvB core complex component.
    
 0.568
ENSSAUP00010056804
annotation not available
 
     0.553
LOC115587153
Protein lin-54 homolog.
    
 0.524
ENSSAUP00010039899
Lin-54 DREAM MuvB core complex component.
    
 0.524
RPA1
Replication protein A 70 kDa DNA-binding subunit-like.
    
 0.507
ENSSAUP00010012434
Replication protein A1.
    
 0.507
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.