STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115580677RNA polymerase II elongation factor ELL2-like. (604 aa)    
Predicted Functional Partners:
eaf1
ELL associated factor 1.
    
 0.925
aff4
AF4/FMR2 family member 4.
   
 0.922
cdk9
Cyclin dependent kinase 9.
    
 0.884
eaf2
ELL associated factor 2.
    
 0.871
polr2c
RNA polymerase II subunit C.
    
 0.860
ENSSAUP00010022370
annotation not available
   
 0.851
ENSSAUP00010022373
annotation not available
   
 0.851
polr2b
RNA polymerase II subunit B.
    
  0.846
supt5h
SPT5 homolog, DSIF elongation factor subunit.
    
 0.838
supt4h1
SPT4 homolog, DSIF elongation factor subunit.
    
 0.828
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.