STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010043120annotation not available (75 aa)    
Predicted Functional Partners:
ENSSAUP00010005082
Missing oocyte, meiosis regulator, homolog (Drosophila).
    
 0.974
CASTOR1
Cytosolic arginine sensor for mTORC1 subunit 1.
  
 
0.965
wdr24
WD repeat domain 24.
    
 0.951
wdr59
WD repeat domain 59.
    
 0.948
LOC115567159
Nucleoporin SEH1.
     
 0.900
sec13
SEC13 homolog, nuclear pore and COPII coat complex component.
     
 0.865
zc2hc1a
Zinc finger C2HC-type containing 1A.
    
 
 0.847
ENSSAUP00010059696
Chromosome 12 open reading frame 66.
    
 0.666
itfg2
Integrin alpha FG-GAP repeat containing 2.
   
 
 0.644
depdc5
DEP domain containing 5, GATOR1 subcomplex subunit.
     
 0.639
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.