STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tm9sf2Transmembrane 9 superfamily member 2. (650 aa)    
Predicted Functional Partners:
LOC115597606
Transmembrane emp24 domain-containing protein 10-like.
   
  
 0.799
ENSSAUP00010019809
Transmembrane p24 trafficking protein 10.
   
  
 0.799
cabcoco1
Ciliary associated calcium binding coiled-coil 1.
   
    0.666
plpp5
Phospholipid phosphatase 5.
    
   0.562
ccdc115
Coiled-coil domain containing 115.
    
   0.562
plpp4
Phospholipid phosphatase 4.
    
   0.562
sptlc1
Serine palmitoyltransferase long chain base subunit 1.
   
  
 0.488
lman2
Lectin, mannose binding 2.
   
 
 0.457
lman2l
Lectin, mannose binding 2 like.
   
 
 0.457
tmed2
Transmembrane p24 trafficking protein 2.
   
 
 0.445
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.