STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010045613Protein tyrosine phosphatase receptor type Fa. (1867 aa)    
Predicted Functional Partners:
ctnnb1
Catenin beta 1.
   
 0.866
LOC115570993
Leucine-rich repeat-containing protein 4B-like.
    
 0.860
ENSSAUP00010059729
Leucine rich repeat containing 4Ba.
    
 0.860
LOC115577155
Interleukin-1 receptor accessory protein-like 1.
   
 0.854
LOC115576980
Insulin receptor substrate 2-like.
    
  0.848
LOC115589753
Insulin receptor substrate 2-B-like.
    
  0.848
irs2
Insulin receptor substrate 2.
    
  0.848
dvl2
Insulin receptor substrate 1-B-like.
    
  0.848
LOC115575352
Catenin beta-1-like.
   
  0.848
ENSSAUP00010061793
Si:ch211-284e13.4.
    
  0.848
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.