STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115573961Myelin transcription factor 1-like protein. (1309 aa)    
Predicted Functional Partners:
ENSSAUP00010025623
Fatty acid synthase.
     
 0.538
LOC115569696
Phthiocerol synthesis polyketide synthase type I PpsD-like.
     
 0.538
ENSSAUP00010037281
annotation not available
     
 0.538
ENSSAUP00010025800
annotation not available
   
   0.495
ENSSAUP00010029481
HECT and RLD domain containing E3 ubiquitin protein ligase 2.
   
   0.495
ENSSAUP00010044959
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1.
   
   0.495
ENSSAUP00010014731
annotation not available
   
    0.414
eif4e2
Eukaryotic translation initiation factor 4E family member 2.
   
    0.414
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.