STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010045885Argonaute RISC catalytic component 2. (908 aa)    
Predicted Functional Partners:
dicer1
Dicer 1, ribonuclease III.
   
 0.948
LOC115570927
Trinucleotide repeat-containing gene 6B protein-like.
    
 0.896
ENSSAUP00010056487
Protein kinase, interferon-inducible double stranded RNA dependent activator.
    
 0.893
tarbp2
TARBP2 subunit of RISC loading complex.
    
 0.893
ENSSAUP00010022754
Trinucleotide repeat containing adaptor 6C2.
    
 0.885
ENSSAUP00010045240
Trinucleotide repeat containing adaptor 6C1.
    
 0.885
tnrc6a
Trinucleotide repeat containing adaptor 6A.
    
 0.885
drosha
Drosha ribonuclease III.
    
 0.872
LOC115573146
Mitochondrial fission factor homolog A-like.
    
 0.841
mrpl44
Mitochondrial ribosomal protein L44.
    
 0.841
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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