STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115594745Nectin-3-like protein. (557 aa)    
Predicted Functional Partners:
ENSSAUP00010052934
Nectin cell adhesion molecule 1b.
    
0.969
ENSSAUP00010020991
Afadin, adherens junction formation factor a.
    
 0.951
ENSSAUP00010009610
annotation not available
    
 
0.882
LOC115573126
Nectin-4-like.
    
 
0.881
pard3
Par-3 family cell polarity regulator.
   
  0.879
PARD3
Partitioning defective 3 homolog.
   
  0.879
LOC115566855
Nectin-2-like.
    
 
0.878
LOC115566463
Nectin-3-like protein.
  
  
 
0.848
LOC115578747
Poliovirus receptor-like.
    
 
0.844
ENSSAUP00010035721
annotation not available
    
 
0.844
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.