STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IKZF4IKAROS family zinc finger 4. (577 aa)    
Predicted Functional Partners:
ENSSAUP00010046194
annotation not available
    
  0.844
crbn
Cereblon.
    
 
 0.761
ddb1
Damage specific DNA binding protein 1.
    
 0.654
ENSSAUP00010046198
annotation not available
    
  0.588
LOC115587574
Thioredoxin domain-containing protein 3 homolog.
    
 0.578
bard1
BRCA1 associated RING domain 1.
    
  0.577
RAD21
Double-strand-break repair protein rad21 homolog A-like.
    
 0.550
LOC115584618
Double-strand-break repair protein rad21 homolog.
    
 0.550
LOC115567674
Double-strand-break repair protein rad21 homolog A-like.
    
 0.550
YTHDC2
YTH domain containing 2.
    
  0.548
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.