STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010047881SAS-6 centriolar assembly protein. (530 aa)    
Predicted Functional Partners:
fancm
FA complementation group M.
   
 0.980
rpa3
Replication protein A3.
   
 0.930
top3a
DNA topoisomerase III alpha.
    
 0.925
prim2
DNA primase subunit 2.
   
 0.920
ENSSAUP00010032807
ATR serine/threonine kinase.
   
 0.913
ENSSAUP00010029055
DNA primase subunit 1.
   
 0.910
rmi1
RecQ mediated genome instability 1.
   
 0.909
RPA1
Replication protein A 70 kDa DNA-binding subunit-like.
   
 0.907
ENSSAUP00010012434
Replication protein A1.
   
 0.907
meiob
Meiosis specific with OB-fold.
   
 0.907
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.