STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115591648Alpha/beta hydrolase domain-containing protein 17A. (316 aa)    
Predicted Functional Partners:
scp2
Sterol carrier protein 2.
    
 0.864
lyplal1
Lysophospholipase like 1.
     
 0.663
ENSSAUP00010005226
Lysophospholipase 1.
     
 0.620
lypla2
Lysophospholipase 2.
     
 0.620
acot8
acyl-CoA thioesterase 8.
     
 0.571
slc27a6
Solute carrier family 27 member 6.
     
 0.564
ENSSAUP00010012703
ALG2 alpha-1,3/1,6-mannosyltransferase.
  
 
 0.531
LOC115588038
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like.
   
 
 0.520
gys2
Glycogen synthase 2.
   
 
 0.520
piga
Phosphatidylinositol glycan anchor biosynthesis class A.
   
 
 0.520
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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