STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galcGalactosylceramidase. (683 aa)    
Predicted Functional Partners:
ENSSAUP00010060275
N-acylsphingosine amidohydrolase (acid ceramidase) 1b.
     
 0.923
ENSSAUP00010059474
Arylsulfatase A.
     
 0.920
ENSSAUP00010027563
Sphingomyelin phosphodiesterase 1.
     
 0.898
gba
Glucosylceramidase beta.
     
 0.896
gba2
Glucosylceramidase beta 2.
     
 0.895
gal3st1
galactose-3-O-sulfotransferase 1.
     
 0.878
sgms1
Sphingomyelin synthase 1.
     
 0.876
asah2
N-acylsphingosine amidohydrolase 2.
     
 0.876
ugcg
UDP-glucose ceramide glucosyltransferase.
     
 0.875
acer1
Alkaline ceramidase 1.
     
 0.875
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.