STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cmblCarboxymethylenebutenolidase homolog. (245 aa)    
Predicted Functional Partners:
ENSSAUP00010005918
Alcohol dehydrogenase iron containing 1.
  
 
 0.937
galm
Galactose mutarotase.
     
 0.874
ENSSAUP00010050277
annotation not available
    
 0.851
mgll
Monoglyceride lipase.
    
 0.851
ppt1
Palmitoyl-protein thioesterase 1.
  
 
 0.847
LOC115567583
Uncharacterized LOC115567583.
  
 
 0.847
LOC115566741
Lysosomal thioesterase PPT2-A-like.
  
 
 0.847
ppt2
Ribosomal protein S5.
  
 
 0.847
hadh
hydroxyacyl-CoA dehydrogenase.
  
 
 0.837
agk
Acylglycerol kinase.
    
 0.835
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.