STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEUROD2Neuronal differentiation 2. (356 aa)    
Predicted Functional Partners:
TCF4
Transcription factor 4.
    
 
 0.557
ENSSAUP00010039920
Transcription factor 3b.
    
 
 0.557
LOC115572079
Transcription factor E2-alpha-like.
    
 
0.557
tcf12
Transcription factor 12.
    
 
 0.557
ENSSAUP00010026705
annotation not available
    
 
 0.556
HES2-2
Hes family bHLH transcription factor 2.
   
 0.526
LOC115585304
Transcription factor HES-5-like.
   
 0.517
LOC115585483
Transcription factor HES-5-like.
   
 0.517
LOC115596466
Transcription cofactor HES-6-like.
    
 0.515
hes4
Hes family bHLH transcription factor 4.
    
 0.512
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.