STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nsd2Nuclear receptor binding SET domain protein 2. (1436 aa)    
Predicted Functional Partners:
ENSSAUP00010040239
DOT1-like histone H3K79 methyltransferase.
   
 0.893
camkmt
Calmodulin-lysine N-methyltransferase.
     
 0.856
setd2
SET domain containing 2, histone lysine methyltransferase.
   
 
0.845
LOC115589962
Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3-like.
    
 0.818
plod2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
    
 0.818
plod1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
    
 0.818
SMYD3
SET and MYND domain containing 3.
     
 0.815
ENSSAUP00010001869
annotation not available
    
  0.801
LOC115583756
Histone H2A.
    
  0.801
ENSSAUP00010001908
annotation not available
    
  0.801
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.