STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115594721Angiomotin-like. (1055 aa)    
Predicted Functional Partners:
yap1
Yes associated protein 1.
    
 0.970
LOC115594005
Merlin-like.
    
 0.969
ENSSAUP00010052236
Neurofibromin 2a (merlin).
    
 0.969
mpp5
Membrane palmitoylated protein 5.
    
 0.958
MPP5
MAGUK p55 subfamily member 5-A-like.
    
 0.958
lats1
Large tumor suppressor kinase 1.
    
 0.905
ENSSAUP00010027224
PATJ crumbs cell polarity complex component.
    
 0.901
mpdz
Multiple PDZ domain crumbs cell polarity complex component.
    
 0.901
ENSSAUP00010057908
annotation not available
    
 0.901
ENSSAUP00010032172
Rho GTPase activating protein 17a.
    
 0.885
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.