STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115592787Annexin A1-like. (346 aa)    
Predicted Functional Partners:
svep1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
  0.590
ENSSAUP00010002647
annotation not available
    
  0.533
ENSSAUP00010014318
Trio Rho guanine nucleotide exchange factor a.
    
  0.533
ENSSAUP00010051705
annotation not available
    
  0.533
ENSSAUP00010069439
Kalirin RhoGEF kinase a.
    
  0.533
WDR1
WD repeat domain 1.
   
 
  0.517
ENSSAUP00010033206
Cleavage stimulation factor, 3' pre-RNA, subunit 2.
    
 0.509
stxbp3
Syntaxin binding protein 3.
    
 0.472
LOC115580939
Syntaxin-binding protein 1-like.
    
 0.472
ENSSAUP00010047849
Syntaxin binding protein 2.
    
 0.472
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.