STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115575698Myosin heavy chain, fast skeletal muscle-like. (1937 aa)    
Predicted Functional Partners:
LOC115588272
Myosin light chain 1, skeletal muscle isoform.
   
 0.865
ENSSAUP00010023140
annotation not available
   
 0.798
LOC115572093
Myosin light chain 3-like.
   
 0.798
ENSSAUP00010001068
annotation not available
   
 0.785
LOC115585031
Myosin light polypeptide 6.
   
 0.785
LOC115570370
Myosin regulatory light chain 2, smooth muscle minor isoform.
   
 0.768
LOC115572494
Myosin regulatory light chain 2, smooth muscle minor isoform-like.
   
 0.768
LOC115583753
Myosin regulatory light polypeptide 9.
   
 0.768
myl7
Myosin light chain 7.
   
 0.761
mylpf
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.736
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.