STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc96Coiled-coil domain containing 96. (472 aa)    
Predicted Functional Partners:
arid4a
AT-rich interaction domain 4A.
    
 0.916
ENSSAUP00010026940
Translocase of outer mitochondrial membrane 20.
    
 0.916
ENSSAUP00010013066
macroH2A.2 histone.
    
 0.873
LOC115594186
Core histone macro-H2A.1.
    
 0.873
LOC115580146
Paired amphipathic helix protein Sin3a-like.
    
 0.789
sin3a
SIN3 transcription regulator family member A.
    
 0.789
sin3b
SIN3 transcription regulator family member B.
    
 0.789
LOC115588252
ranBP2-like and GRIP domain-containing protein 3.
  
 0.772
RBBP7
Histone-binding protein RBBP4-like.
   
 0.745
LOC115580212
Histone-binding protein RBBP7.
   
 0.745
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.