STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010053204ATPase 13A1. (1200 aa)    
Predicted Functional Partners:
pln
Phospholamban.
    
 0.765
LOC115587574
Thioredoxin domain-containing protein 3 homolog.
   
 0.641
ENSSAUP00010001079
annotation not available
    
 0.619
ENSSAUP00010014480
annotation not available
    
 0.619
LOC115593899
Sodium/potassium-transporting ATPase subunit beta-2-like.
    
 0.619
atp7a
ATPase copper transporting alpha.
   
 0.616
ENSSAUP00010013616
Phosphoglycerate kinase 1.
    
 
 0.616
LOC115577351
Copper-transporting ATPase 2-like.
   
 0.616
ENSSAUP00010034831
annotation not available
    
  0.608
LOC115574067
Cell cycle control protein 50A-like.
    
 0.602
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.