STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115575401Inactive phospholipase C-like protein 2. (1209 aa)    
Predicted Functional Partners:
pmch
Pro-melanin concentrating hormone.
   
 
 0.893
LOC115592931
pro-MCH-like.
   
 
 0.893
hcrtr2
Hypocretin receptor 2.
    
 0.886
LOC115581088
Isotocin-neurophysin IT 1-like.
   
 
 0.735
trh
Thyrotropin releasing hormone.
     
 0.731
ENSSAUP00010014577
Neurotensin.
     
 0.714
LOC115582523
Ghrelin-like.
     
 0.701
LOC115569079
Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2B-like.
     
 0.700
inppl1
Inositol polyphosphate phosphatase like 1.
     
 0.700
tac1
Tachykinin precursor 1.
     
 0.686
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.