STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115585499Tyrosine-protein phosphatase non-receptor type 11-like. (594 aa)    
Predicted Functional Partners:
gab2
GRB2 associated binding protein 2.
    
 0.953
pdgfrb
Platelet derived growth factor receptor beta.
   
 0.950
LOC115590622
GRB2-associated-binding protein 1-like.
    
 0.934
gab1
GRB2 associated binding protein 1.
    
 0.934
LOC115576166
Growth factor receptor-bound protein 2.
   
0.931
ENSSAUP00010023061
annotation not available
   
0.931
SOS1
SOS Ras/Rac guanine nucleotide exchange factor 1.
    
 0.922
sos2
SOS Ras/Rho guanine nucleotide exchange factor 2.
    
 0.922
LOC115583093
Fibroblast growth factor receptor substrate 2-like.
    
 0.903
syk
Spleen associated tyrosine kinase.
   
0.895
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.