STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ifih1Interferon induced with helicase C domain 1. (992 aa)    
Predicted Functional Partners:
dhx58
DExH-box helicase 58.
  
0.975
top3a
DNA topoisomerase III alpha.
   
 0.960
fancl
FA complementation group L.
    
 0.958
ENSSAUP00010030897
FA complementation group G.
    
 0.957
fancc
FA complementation group C.
    
 0.956
fancf
FA complementation group F.
    
 0.956
ENSSAUP00010036588
FA complementation group B.
   
 0.956
rmi2
RecQ mediated genome instability 2.
    
 0.949
mavs
Mitochondrial antiviral signaling protein.
    
 0.947
ENSSAUP00010062713
Ribosomal protein S27a.
   
 0.944
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.