STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115571307acyl-CoA desaturase-like. (335 aa)    
Predicted Functional Partners:
fads2
Fatty acid desaturase 2.
  
 0.917
elovl6
ELOVL fatty acid elongase 6.
   
 0.914
ENSSAUP00010057469
Hydroxysteroid (20-beta) dehydrogenase 2.
  
 0.877
gstk1
Glutathione S-transferase kappa 1.
   
 0.863
LOC115587083
Very-long-chain 3-oxoacyl-CoA reductase-A-like.
  
 0.861
LOC115580500
Very-long-chain 3-oxoacyl-CoA reductase-B-like.
  
 0.861
LOC115567700
Cytochrome b5 reductase 4.
    
 0.851
LOC115596657
Elongation of very long chain fatty acids protein 6-like.
   
 0.838
LOC115571200
Elongation of very long chain fatty acids protein 6-like.
   
 0.838
hacd4
3-hydroxyacyl-CoA dehydratase 4.
     
 0.811
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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