STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115574848Peroxisomal membrane protein PMP34-like. (315 aa)    
Predicted Functional Partners:
ENSSAUP00010035447
Peroxisomal biogenesis factor 19.
   
 0.914
slc25a17
Solute carrier family 25 member 17.
  
  
 
0.847
pex13
Peroxisomal biogenesis factor 13.
   
 
 0.789
pex16
Peroxisomal biogenesis factor 16.
   
 
 0.775
pex12
Peroxisomal biogenesis factor 12.
     
 0.772
rpl36a
Ribosomal protein L36a.
   
 
 0.762
pex11b
Peroxisomal biogenesis factor 11 beta.
   
 0.760
LOC115586701
Peroxisomal membrane protein 11A-like.
   
 0.760
abcd3
ATP binding cassette subfamily D member 3.
   
 
 0.741
pex11g
Peroxisomal biogenesis factor 11 gamma.
   
 0.739
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.