STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115571102Dickkopf-related protein 3-like. (196 aa)    
Predicted Functional Partners:
c6
Complement C6.
   
  0.651
LOC115581181
Interleukin-1 beta-like.
    
 0.648
ENSSAUP00010059403
annotation not available
    
 0.638
LOC115587611
Interleukin-1 receptor type 1-like.
    
  0.609
LOC115587504
Interleukin-1 receptor type 1-like.
    
  0.609
LOC115588478
Interleukin-1 receptor type 1-like.
    
  0.609
dab1
DAB adaptor protein 1.
   
 0.499
ENSSAUP00010025051
annotation not available
   
 0.499
LOC115590832
FYN-binding protein 1-like.
   
 0.499
LOC115572908
Disabled homolog 1-like.
   
 0.499
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.