STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115578856Adhesion G protein-coupled receptor L3-like. (1596 aa)    
Predicted Functional Partners:
LOC115568845
Teneurin-1-like.
    
 
 0.996
szrd1
SUZ RNA binding domain containing 1.
    
 
 0.995
LOC115567020
Vascular endothelial growth factor A-A-like.
    
 
 0.995
LOC115568823
Teneurin-3-like.
    
 
 0.995
LOC115585166
SUZ domain-containing protein 1-like.
    
 
 0.995
ENSSAUP00010048945
annotation not available
    
 
 0.995
LOC115576559
Vascular endothelial growth factor C-like.
    
 
 0.995
tenm4
Teneurin transmembrane protein 4.
    
 
 0.995
tenm2
Teneurin transmembrane protein 2.
    
 
 0.995
ENSSAUP00010024500
Unc-5 netrin receptor A.
   
 
 0.994
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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