STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
erlec1Endoplasmic reticulum lectin 1. (482 aa)    
Predicted Functional Partners:
derl1
Derlin 1.
    
 0.981
sel1l
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
   
 0.974
syvn1
Synoviolin 1.
   
 0.967
ENSSAUP00010024829
Autocrine motility factor receptor a.
   
 0.966
LOC115581726
Derlin-2-like.
    
 0.966
derl2
Derlin 2.
    
 0.966
LOC115591503
Protein sel-1 homolog 3-like.
   
 0.940
ENSSAUP00010058773
Si:dkey-24p1.6.
   
 0.940
dele1
DAP3 binding cell death enhancer 1.
   
 0.917
vcp
Valosin containing protein.
    
 0.916
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.